Publications

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252 results

252 results

2025

Aiba, Toshihiko, Eliezer Calo, and Angela N Koehler. [2025] 2025. “Chemical Probe Discovery for DEAD-Box RNA-Binding Protein DDX21 Using Small-Molecule Microarrays.”. ACS Chemical Biology. doi:10.1021/acschembio.5c00302.
Aiba, Toshihiko, Eliezer Calo, and Angela N Koehler. [2025] 2025. “Chemical Probe Discovery for DEAD-Box RNA-Binding Protein DDX21 Using Small-Molecule Microarrays.”. ACS Chemical Biology. doi:10.1021/acschembio.5c00302.
Liu, Xin, Camille Le Gall, Ryan K Alexander, Ella Borgman, Thomas Balligand, and Hidde L Ploegh. [2025] 2025. “Nanobody-Based Bispecific Antibody Engagers Targeting CTLA-4 or PD-L1 for Cancer Immunotherapy.”. Nature Biomedical Engineering. doi:10.1038/s41551-025-01447-z.
Liu, Xin, Camille Le Gall, Ryan K Alexander, Ella Borgman, Thomas Balligand, and Hidde L Ploegh. [2025] 2025. “Nanobody-Based Bispecific Antibody Engagers Targeting CTLA-4 or PD-L1 for Cancer Immunotherapy.”. Nature Biomedical Engineering. doi:10.1038/s41551-025-01447-z.
Di Gioia, Marco, Valentina Poli, Piao J Tan, Roberto Spreafico, Anne Chu, Alex G Cuenca, Zhongyang Wu, Mehdi Benamar, Laura Pandolfi, Federica Meloni, Fatemeh Askarian, Jason Hsiao, Elizaveata Borroum, Victor Nizet, Philip L S M Gordts, Joseph L Witztum, Talal A Chatila, Janet Chou, Xu Zhou, James R Springstead, and Ivan Zanoni. [2025] 2025. “Epigenetic Silencing of Interleukin-10 by Host-Derived Oxidized Phospholipids Supports a Lethal Inflammatory Response to Infections.”. Immunity. doi:10.1016/j.immuni.2025.06.017.
Di Gioia, Marco, Valentina Poli, Piao J Tan, Roberto Spreafico, Anne Chu, Alex G Cuenca, Zhongyang Wu, Mehdi Benamar, Laura Pandolfi, Federica Meloni, Fatemeh Askarian, Jason Hsiao, Elizaveata Borroum, Victor Nizet, Philip L S M Gordts, Joseph L Witztum, Talal A Chatila, Janet Chou, Xu Zhou, James R Springstead, and Ivan Zanoni. [2025] 2025. “Epigenetic Silencing of Interleukin-10 by Host-Derived Oxidized Phospholipids Supports a Lethal Inflammatory Response to Infections.”. Immunity. doi:10.1016/j.immuni.2025.06.017.
Shlosman, Irina, Andrea Vettiger, Thomas G Bernhardt, Andrew C Kruse, and Joseph J Loparo. [2025] 2025. “The Hit-and-Run of Cell Wall Synthesis: LpoB Transiently Binds and Activates PBP1b through a Conserved Allosteric Switch.”. Nature Communications 16(1):6723. doi:10.1038/s41467-025-62051-y.
Shlosman, Irina, Andrea Vettiger, Thomas G Bernhardt, Andrew C Kruse, and Joseph J Loparo. [2025] 2025. “The Hit-and-Run of Cell Wall Synthesis: LpoB Transiently Binds and Activates PBP1b through a Conserved Allosteric Switch.”. Nature Communications 16(1):6723. doi:10.1038/s41467-025-62051-y.
Hurley, Joseph D, Irina Shlosman, Megha Lakshminarayan, Ziyuan Zhao, Hong Yue, Radosław P Nowak, Eric S Fischer, and Andrew C Kruse. [2025] 2025. “Decoding Protein-Peptide Interactions Using a Large, Target-Agnostic Yeast Surface Display Library.”. BioRxiv : The Preprint Server for Biology. doi:10.1101/2025.05.19.654863.
Hurley, Joseph D, Irina Shlosman, Megha Lakshminarayan, Ziyuan Zhao, Hong Yue, Radosław P Nowak, Eric S Fischer, and Andrew C Kruse. [2025] 2025. “Decoding Protein-Peptide Interactions Using a Large, Target-Agnostic Yeast Surface Display Library.”. BioRxiv : The Preprint Server for Biology. doi:10.1101/2025.05.19.654863.
Zuo, Teng, Avneesh Gautam, Shahab Saghaei, Sweta N Khobragade, Rahaman Ahmed, Azadeh Mahdavinia, Mehrdad Zarghami, Gaspar A Pacheco, Kenneth Green, Meghan Travers, Nicholas Garcia, Zahra Allahyari, Vishal Rao, Sachin Kumar, Robert Novak, Joyce K Hwang, and Duane R Wesemann. [2025] 2025. “Somatic Hypermutation Unlocks Antibody Specificities Beyond the Primary Repertoire.”. Immunity. doi:10.1016/j.immuni.2025.04.014.
Zuo, Teng, Avneesh Gautam, Shahab Saghaei, Sweta N Khobragade, Rahaman Ahmed, Azadeh Mahdavinia, Mehrdad Zarghami, Gaspar A Pacheco, Kenneth Green, Meghan Travers, Nicholas Garcia, Zahra Allahyari, Vishal Rao, Sachin Kumar, Robert Novak, Joyce K Hwang, and Duane R Wesemann. [2025] 2025. “Somatic Hypermutation Unlocks Antibody Specificities Beyond the Primary Repertoire.”. Immunity. doi:10.1016/j.immuni.2025.04.014.
Yosfan, Omri. [2025] 2025. “Hormone Biosensor Optimization With a Novel Biophysical Modeling Pipeline.”. Boston University, Boston.
Yosfan, Omri. [2025] 2025. “Hormone Biosensor Optimization With a Novel Biophysical Modeling Pipeline.”. Boston University, Boston.
Suresh, Pavana, Sun Zhen-Yu Jim, Ishani Sahay, Allison Y Tang, Charlotte Wijne, Jin Gan, Novalia Pishesha, Jose L Avalos, and Hidde Ploegh. [2025] 2025. “Growth Inhibition of Saccharomyces Cerevisiae by SUMO-Specific Nanobodies.”. Scientific Reports 15(1):18368. doi:10.1038/s41598-025-02380-6.
Suresh, Pavana, Sun Zhen-Yu Jim, Ishani Sahay, Allison Y Tang, Charlotte Wijne, Jin Gan, Novalia Pishesha, Jose L Avalos, and Hidde Ploegh. [2025] 2025. “Growth Inhibition of Saccharomyces Cerevisiae by SUMO-Specific Nanobodies.”. Scientific Reports 15(1):18368. doi:10.1038/s41598-025-02380-6.
Sabbarini, Ibrahim M. [2025] 2025. “Novel Drivers of Eukaryotic Protein Biogenesis and Complex Assembly.”. Harvard University, Cambridge.
Sabbarini, Ibrahim M. [2025] 2025. “Novel Drivers of Eukaryotic Protein Biogenesis and Complex Assembly.”. Harvard University, Cambridge.
Brookner, Dennis E. [2025] 2025. “Evolutionary Motif Swapping of Human Dihydrofolate Reductase Rewires the Enzymatic Cycle.”. Harvard University, Cambridge, MA.
Brookner, Dennis E. [2025] 2025. “Evolutionary Motif Swapping of Human Dihydrofolate Reductase Rewires the Enzymatic Cycle.”. Harvard University, Cambridge, MA.
Watson, Sean M, Edward P Harvey, Novalia Pishesha, Hidde L Ploegh, and Timothy A Springer. [2025] 2025. “Nanobodies Targeting EGFR Provide Insight into Conformations Stabilized by Glioblastoma Mutations.”. The Journal of Biological Chemistry 110374. doi:10.1016/j.jbc.2025.110374.
Watson, Sean M, Edward P Harvey, Novalia Pishesha, Hidde L Ploegh, and Timothy A Springer. [2025] 2025. “Nanobodies Targeting EGFR Provide Insight into Conformations Stabilized by Glioblastoma Mutations.”. The Journal of Biological Chemistry 110374. doi:10.1016/j.jbc.2025.110374.
Suresh, Pavana, Charlotte Wijne, Zhen-Yu J Sun, Nanette Becht, Ishani Sahay, Novalia Pishesha, and Hidde Ploegh. [2025] 2025. “A Nanobody That Binds to the Backside of the Ubiquitin Conjugating Enzyme Ube2G2 Differentially Affects Interactions With Its Partner E3 Ligases.”. Communications Biology 8(1):614. doi:10.1038/s42003-025-08038-3.
Suresh, Pavana, Charlotte Wijne, Zhen-Yu J Sun, Nanette Becht, Ishani Sahay, Novalia Pishesha, and Hidde Ploegh. [2025] 2025. “A Nanobody That Binds to the Backside of the Ubiquitin Conjugating Enzyme Ube2G2 Differentially Affects Interactions With Its Partner E3 Ligases.”. Communications Biology 8(1):614. doi:10.1038/s42003-025-08038-3.